The detailed information of tRNA gene sequence


Sequence ID>WENV170643794
Genome IDJMBV01000972
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1169
End posion on genome 1256
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgatatttt
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAACAGTTTGCTAAACTGTCGTATCTTTACGGGTA
CCGGGGGTTCGAATCCCCCCCTCTCTCCgc
Downstream region at tRNA end position 
ggggtctata
Secondary structure (Cloverleaf model)
>WENV170643794	Ser	GCT
                   t      CCgc ggggtctata
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTATCTTTACGGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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