The detailed information of tRNA gene sequence


Sequence ID>WENV170643795
Genome IDJMBV01000972
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1275
End posion on genome 1352
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tatataatct
tRNA gene sequence 
CGGGGTATAGCGTAGTCCGGTTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGTAAGTTCGA
ATCTTACTACCCCCCCGA
Downstream region at tRNA end position 
caactgaaaa
Secondary structure (Cloverleaf model)
>WENV170643795	Pro	TGG
                   t      CCGA caactgaaaa
                     C   C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C A T T C     A
    C T G A        A      | | | | |     G
  C         T G C G       G T A A G     C
  G         + | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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