The detailed information of tRNA gene sequence


Sequence ID>WENV170643797
Genome IDJMBV01000977
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1828
End posion on genome 1901
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attttgatac
tRNA gene sequence 
GGTACCATGGCCGAGTGGTTAGGCAACGGTCTGCAAAACCGTGTACAGCGGTTCGACTCC
GCTTGGTACCTCTA
Downstream region at tRNA end position 
ctttaaaacc
Secondary structure (Cloverleaf model)
>WENV170643797	Cys	GCA
                   c      TCTA ctttaaaacc
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     A - T          T C
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        T T        A     GTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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