The detailed information of tRNA gene sequence


Sequence ID>WENV170643805
Genome IDJMBV01001141
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 653
End posion on genome 745
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaatatattg
tRNA gene sequence 
GGAGAGATGCTGGAGTCCGGCTGAACAGGCACGACTGGAAATCGTGTAGGGGTGATGAGC
CCCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttaaactt
Secondary structure (Cloverleaf model)
>WENV170643805	Ser	GGA
                   g      GCCA ttttaaactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  C         G G T C       G A G G G     C
  G           | | |                 T T
  G         A C A G
    C T G A        G     TAGGGGTGATGAGCCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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