The detailed information of tRNA gene sequence


Sequence ID>WENV170643809
Genome IDJMBV01001235
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 811
End posion on genome 884
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaaaaaatat
tRNA gene sequence 
GGGCCCATGGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGTCGAGAGTTCGAAT
CTCTCTGGGTCCACtc
Downstream region at tRNA end position 
aaaaacgaac
Secondary structure (Cloverleaf model)
>WENV170643809	Ala	GGC
                   t      ACtc aaaaacgaac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    T       C G C G       G A G A G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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