The detailed information of tRNA gene sequence


Sequence ID>WENV170643817
Genome IDJMBV01001501
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3696
End posion on genome 3622
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attcatatat
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATTCCCCAGTTCGAATC
TGGGTGCCGCCTCCA
Downstream region at tRNA end position 
gttaaataaa
Secondary structure (Cloverleaf model)
>WENV170643817	Cys	GCA
                   t      TCCA gttaaataaa
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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