The detailed information of tRNA gene sequence


Sequence ID>WENV170643823
Genome IDJMBV01001515
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3383
End posion on genome 3454
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcacgctgg
tRNA gene sequence 
GGGCCCGTAGCTCAATGGCGGAGCAGGCGGCTCATAACCGCTTGGTTGTTGGTTCGAATC
CATCCGGGCCCAtgt
Downstream region at tRNA end position 
tttatttaag
Secondary structure (Cloverleaf model)
>WENV170643823	Met	CAT
                   g      Atgt tttatttaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T A C C     A
        A A        A      |   | | |     G
      T     C T C G       G T T G G     C
      G     | | | |                 T T
      G     G A G C
        C G        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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