The detailed information of tRNA gene sequence


Sequence ID>WENV170643826
Genome IDJMBV01001564
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 2201
End posion on genome 2130
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attcgttatc
tRNA gene sequence 
GGCGAGATAGCTCAACGGTGGAGCAGTGGACTCATAAGCCATTGGTTCTGGGTTCAAATC
CCAGTCTCGCCAttt
Downstream region at tRNA end position 
ttttatttaa
Secondary structure (Cloverleaf model)
>WENV170643826	Met	CAT
                   c      Attt ttttatttaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
        A A        A      | | | | |     A
      C     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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