The detailed information of tRNA gene sequence


Sequence ID>WENV170643828
Genome IDJMBV01001581
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3175
End posion on genome 3100
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taacacacac
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGTAGAGCGACGGTCTCCAAAACCGTAGGCTGTGGGTTCGATT
CCTACCTCCCGTGCTA
Downstream region at tRNA end position 
tcaaatgaaa
Secondary structure (Cloverleaf model)
>WENV170643828	Trp	CCA
                   c      GCTA tcaaatgaaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T T
                    T     C A T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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