The detailed information of tRNA gene sequence


Sequence ID>WENV170643834
Genome IDJMBV01001629
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 2223
End posion on genome 2152
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcttttatta
tRNA gene sequence 
GGCGACGTGGCCAAGTGGTAAGGCAGGAGTCTGCAAAACTCTCATCATGGGTTCGATTCC
CATCGTCGCCTCtt
Downstream region at tRNA end position 
ttttttgtgt
Secondary structure (Cloverleaf model)
>WENV170643834	Cys	GCA
                   a      TCtt ttttttgtgt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T A C C C     A
        G A        G      | | | | |     G
      T     A C C G       A T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    G + T
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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