The detailed information of tRNA gene sequence


Sequence ID>WENV170643836
Genome IDJMBV01001707
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 2898
End posion on genome 2969
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctgcaggg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGCGGAGCAGGCGGCTCATAACCGCTTGGTTGATGGTTCGAATC
CATCCGGGCCCAttt
Downstream region at tRNA end position 
tcttttattt
Secondary structure (Cloverleaf model)
>WENV170643836	Met	CAT
                   g      Attt tcttttattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C T A C C     A
        A A        A      | | | | |     G
      T     C T C G       G A T G G     C
      G     | | | |                 T T
      G     G A G C
        C G        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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