The detailed information of tRNA gene sequence


Sequence ID>WENV170643838
Genome IDJMBV01001748
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1915
End posion on genome 1838
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgcttcacgg
tRNA gene sequence 
GGGGGCGTGGCTCAGCCCGGATAGAGTGCACGGTTCGGGTCCGTGAGGTCGGCGGTTCAA
ATCCGCCCGCCCCCCCGA
Downstream region at tRNA end position 
caaaataata
Secondary structure (Cloverleaf model)
>WENV170643838	Pro	CGG
                   g      CCGA caaaataata
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C G C C     A
    C C G A        G      | | | | |     A
  C         C T C G       G G C G G     C
  G         | | | +                 T T
  G         G A G T
    A T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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