The detailed information of tRNA gene sequence


Sequence ID>WENV170643841
Genome IDJMBV01002078
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 2484
End posion on genome 2394
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caatggtcat
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGCTGAAGGCGCTCGCCTGGAAAGCGGGTAAACGTGAAAGCGT
TTCAAGGGTTCAAATCCCTTTCTCTCCGCCA
Downstream region at tRNA end position 
ttaggaaatt
Secondary structure (Cloverleaf model)
>WENV170643841	Ser	GGA
                   t      GCCA ttaggaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
    T T G A        G      | | | | |     A
  G         G C C G       A A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAAACGTGAAAGCGTTTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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