The detailed information of tRNA gene sequence


Sequence ID>WENV170643846
Genome IDJMBV01002416
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1080
End posion on genome 1155
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tagactaggt
tRNA gene sequence 
GGGTCATTAGCTCAGGTGGTAGAGCACCGGACTTTTAATCCGGGTGTCGTGGGTTCGAGT
CCCGCATGACCCACCA
Downstream region at tRNA end position 
gttatttttg
Secondary structure (Cloverleaf model)
>WENV170643846	Lys	TTT
                   t      ACCA gttatttttg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     T - A          T G
                    T     C G C C C     A
      G G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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