The detailed information of tRNA gene sequence


Sequence ID>WENV170643848
Genome IDJMBV01002451
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 372
End posion on genome 449
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actaacagaa
tRNA gene sequence 
AGGGGAGTAGCTCAACGGGAAGAGCAACGGTCTCCAAAACCGTAGGCTGCGGGTTCGAGT
CCTGTCTCCCCCCTGCCA
Downstream region at tRNA end position 
gtaaaaccgc
Secondary structure (Cloverleaf model)
>WENV170643848	Trp	CCA
                   a      GCCA gtaaaaccgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A   C
                     G - C          C C
                    T     T C T G T     T
      C A A        A      + | + +       G
    G       C T C G       G G G T T     A
    G       | | | |                 C G
    G       G A G C
      A A          A     AGGCTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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