The detailed information of tRNA gene sequence


Sequence ID>WENV170643866
Genome IDJMBV01003512
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1480
End posion on genome 1555
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctgacacttt
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTTCGGAGGTTCGA
GTCCTCTAGCGCCCACac
Downstream region at tRNA end position 
ttaggccgaa
Secondary structure (Cloverleaf model)
>WENV170643866	Val	CAC
                   t      ACac ttaggccgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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