The detailed information of tRNA gene sequence


Sequence ID>WENV170643867
Genome IDJMBV01004018
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 81
End posion on genome 156
Amino Acid Gly
Anticodon ACC
Upstream region at tRNA start position 
ttttcgcagg
tRNA gene sequence 
GGGGGAGTAGCTCAATTGGTAGAGCATCGGTCTACCAAACCGAGGGCTGCGGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
ttatttcaaa
Secondary structure (Cloverleaf model)
>WENV170643867	Gly	ACC
                   g      GCCA ttatttcaaa
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    A C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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