The detailed information of tRNA gene sequence


Sequence ID>WENV170643872
Genome IDJMBV01004286
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 321
End posion on genome 228
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcggattaat
tRNA gene sequence 
GGAGAGATGACCGAGTTGGTTGAAGGTGCACGCCTGGAAAGCGTGTGTAGGGGGGGAAAC
TCTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taaataaagg
Secondary structure (Cloverleaf model)
>WENV170643872	Ser	GGA
                   t      GCCA taaataaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  T         A G G T
    T G A          G     TGTAGGGGGGGAAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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