The detailed information of tRNA gene sequence


Sequence ID>WENV170643874
Genome IDJMBV01004328
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 699
End posion on genome 621
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcagataacc
tRNA gene sequence 
GGGGATGTAGCTTAGTCGGGAGAGCGCCTCCTTTGCAAGGAGGAGGTCAGGGGGGGTTCG
AGTCCCCTCATCTCCACAA
Downstream region at tRNA end position 
ggaagatgca
Secondary structure (Cloverleaf model)
>WENV170643874	Ala	TGC
                   c      ACAA ggaagatgca
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      + | | | |     G
    C       T T C G       G G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTCAGG
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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