The detailed information of tRNA gene sequence


Sequence ID>WENV170643882
Genome IDJMBV01004713
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 339
End posion on genome 261
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tattagttgt
tRNA gene sequence 
GCACCCGTAGCTCAGCAGGATAGAGCAGCGCCCTCCTAAGGCGTGTGTCGGGGGGGTTCG
ACTCCTCTCGGGTGCGCCA
Downstream region at tRNA end position 
caattttggt
Secondary structure (Cloverleaf model)
>WENV170643882	Arg	CCT
                   t      GCCA caattttggt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T C T C C     A
      C G A        A      + | + | |     G
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GTGTCGG
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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