The detailed information of tRNA gene sequence


Sequence ID>WENV170643888
Genome IDJMBV01005172
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1298
End posion on genome 1223
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gattaggttt
tRNA gene sequence 
GCACCTTTAGCTCAGTCGGCAGAGCAATTGACTCTTAATCAATGGGCCCAGGGTTCGAAT
CCCTGAAGGTGCACCA
Downstream region at tRNA end position 
gttaaataca
Secondary structure (Cloverleaf model)
>WENV170643888	Lys	CTT
                   t      ACCA gttaaataca
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGCC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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