The detailed information of tRNA gene sequence


Sequence ID>WENV170643890
Genome IDJMBV01005431
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 389
End posion on genome 485
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgttgccacg
tRNA gene sequence 
gGGGGGGTAGTTGGCGGTCTGGTGACGCTCATGGACTTCAAATCCAGTGGTGGGCGCGAT
CCGTCCACGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
aaaaaattag
Secondary structure (Cloverleaf model)
>WENV170643890	SeC(p)	TCA
                   g      GCCA aaaaaattag
                     g - C
                     G - C
                     G - C
                     G + T
                     G - C
                     G   A
                     G + T
                     T   C          T T
                    A     T A C C C     A
    T G G C        G      + | | | |     G
  C         G G T T       G T G G G     C
  T         |                       T T
  G         C G C T
    G T G A        C     TGGTGGGCGCGATCCGTCCACG
                    A   G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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