The detailed information of tRNA gene sequence


Sequence ID>WENV170643892
Genome IDJMBV01005462
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1192
End posion on genome 1270
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagagatggg
tRNA gene sequence 
GGGGCTTTGGCGAAGTTGGGATCGCGTCTGACTGGCAGTCAGAAGATCAGGGGGGGTTCG
AATCCCCTAAGCTCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170643892	Ala	GGC
                   g      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          T A
                    T     T C C C C     A
      T G A        G      + | | | |     G
    T       A G C G       G G G G G     C
    G       | | | |                 T T
    G       T C G C
      G A          G     AGATCAGG
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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