The detailed information of tRNA gene sequence


Sequence ID>WENV170643893
Genome IDJMBV01005559
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1200
End posion on genome 1112
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
agttattagt
tRNA gene sequence 
GCCCGGGTGGCGGAACTGGCAGACGCGCACGTTTGAGGGGCGTGTGGGTAACCCCCCCCA
TACGAGTTCAAGTCTCGTCCCGGGCACCA
Downstream region at tRNA end position 
ttttttttgc
Secondary structure (Cloverleaf model)
>WENV170643893	Leu	GAG
                   t      ACCA ttttttttgc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     T G C T C     A
      C A A        G      | | | | |     A
    T       G G C G       A C G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGTAACCCCCCCCAT
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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