The detailed information of tRNA gene sequence


Sequence ID>WENV170643896
Genome IDJMBV01006046
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 92
End posion on genome 166
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggaagcgcaa
tRNA gene sequence 
AGGTCAGTGGCTCAATTGGCAGAGCACCGCTCTCCAAAAGCGGGGGGGTTGAGGGTTCGA
GTCCTTCCTGACCTGttg
Downstream region at tRNA end position 
aagtcaatca
Secondary structure (Cloverleaf model)
>WENV170643896	Trp	CCA
                   a      Gttg aagtcaatca
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        G      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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