The detailed information of tRNA gene sequence


Sequence ID>WENV170643903
Genome IDJMBV01006497
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 412
End posion on genome 488
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcttcaga
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAACTGACTCATAATCAGTAGGTCGCTGGTTCAAG
TCCAGCTGGGCCCACAA
Downstream region at tRNA end position 
ataaaaggaa
Secondary structure (Cloverleaf model)
>WENV170643903	Met	CAT
                   a      ACAA ataaaaggaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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