The detailed information of tRNA gene sequence


Sequence ID>WENV170643914
Genome IDJMBV01007806
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 788
End posion on genome 862
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcaacgaagg
tRNA gene sequence 
GGGGGTGTAGTTCAGCGGTAGAACGTCGGTCTCCAAAACCGAATGCCGTGGGTTCGAGTC
CTGCCACCCCTGCCA
Downstream region at tRNA end position 
tttagaggtg
Secondary structure (Cloverleaf model)
>WENV170643914	Trp	CCA
                   g      GCCA tttagaggtg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
        G A        A      | + + | |     G
      C     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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