The detailed information of tRNA gene sequence


Sequence ID>WENV170643925
Genome IDJMBV01009741
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 618
End posion on genome 543
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgtcttatgC
tRNA gene sequence 
AGGGGAGTAGCTCAACTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGCGGGTTCAAGT
CCTGTCTCCCTGCCAt
Downstream region at tRNA end position 
tttatgtgat
Secondary structure (Cloverleaf model)
>WENV170643925	Trp	CCA
                   C      CCAt tttatgtgat
                     A   G
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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