The detailed information of tRNA gene sequence


Sequence ID>WENV170643939
Genome IDJMBV01012251
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 483
End posion on genome 558
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agaagaatgt
tRNA gene sequence 
GGGGACGTAGCTCAGTTGGGAGAGCGCGTGAATGGCATTCATGAGGTCGTGGGTTCGAAT
CCCATCGTCTCCACCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV170643939	Ala	GGC
                   t      ACCA ttttttttat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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