The detailed information of tRNA gene sequence


Sequence ID>WENV170643954
Genome IDJMBV01013683
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 667
End posion on genome 593
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agaaaagggc
tRNA gene sequence 
GCCGGCGTAGCTCAATGGTAGAGCAACCGCCTTGTAAGCGGTAGGTTATGAGTTCGATTC
TCATCGTCGGCTTCA
Downstream region at tRNA end position 
ttgcacattc
Secondary structure (Cloverleaf model)
>WENV170643954	Thr	TGT
                   c      TTCA ttgcacattc
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     C - G
                     G - C          T T
                    T     T A C T C     A
        A A        A      | | | | |     G
      T     C T C G       A T G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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