The detailed information of tRNA gene sequence


Sequence ID>WENV170643960
Genome IDJMBV01014427
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 211
End posion on genome 290
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgtttgggg
tRNA gene sequence 
GGGCCTTTAGCTCAGTCGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCGGGGGGGTTC
GAGTCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
aaatttcaac
Secondary structure (Cloverleaf model)
>WENV170643960	Met	CAT
                   g      ACCA aaatttcaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A        + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCCGG
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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