The detailed information of tRNA gene sequence


Sequence ID>WENV170643967
Genome IDJMBV01014830
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 578
End posion on genome 654
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaaatgggg
tRNA gene sequence 
GGCCTGGTAGTTCAGATGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCAGGTCGCCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>WENV170643967	Asp	GTC
                   g      GCCA aannnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T T C C C     A
      A G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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