The detailed information of tRNA gene sequence


Sequence ID>WENV170643979
Genome IDJMBV01016565
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 27
End posion on genome 119
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caatactttt
tRNA gene sequence 
GGAGAGGTGGCTGAGTCTGGCCGAAGGCGCACGACTGGAAATCGTGTAAACGTGATGAGC
GTTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
acataatttt
Secondary structure (Cloverleaf model)
>WENV170643979	Ser	GGA
                   t      GCCA acataatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G T C G       G A G G G     C
  G           + | |                 T T
  G         A G G C
    C C G A        G     TAAACGTGATGAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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