The detailed information of tRNA gene sequence


Sequence ID>WENV170643980
Genome IDJMBV01016610
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 426
End posion on genome 347
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaggtagggg
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCTGGGGGGGTTC
GAGTCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
atgatggagg
Secondary structure (Cloverleaf model)
>WENV170643980	Met	CAT
                   g      ACCA atgatggagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A        + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCTGG
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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