The detailed information of tRNA gene sequence


Sequence ID>WENV170643987
Genome IDJMBV01017885
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 380
End posion on genome 456
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcatggcac
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTCAGAGCATACGGTTCATACCCGTAGAGTCGCTGGTTCAAA
TCCAGCCGCCGCTACCA
Downstream region at tRNA end position 
tgaataatac
Secondary structure (Cloverleaf model)
>WENV170643987	Met	CAT
                   c      ACCA tgaataatac
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GAGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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