The detailed information of tRNA gene sequence


Sequence ID>WENV170644004
Genome IDJMBV01020763
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 190
End posion on genome 263
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccattatcgC
tRNA gene sequence 
GGGGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCAAAT
CCTACCCCCGCAAttt
Downstream region at tRNA end position 
attacaactg
Secondary structure (Cloverleaf model)
>WENV170644004	Met	CAT
                   C      Attt attacaactg
                     G   A
                     G - C
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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