The detailed information of tRNA gene sequence


Sequence ID>WENV170644011
Genome IDJMBV01021535
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 149
End posion on genome 225
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataaaacat
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCGGCTCCCGCAACCA
Downstream region at tRNA end position 
ttatttatcc
Secondary structure (Cloverleaf model)
>WENV170644011	Met	CAT
                   t      ACCA ttatttatcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | + | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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