The detailed information of tRNA gene sequence


Sequence ID>WENV170644014
Genome IDJMBV01021833
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 234
End posion on genome 145
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aactaaataa
tRNA gene sequence 
GCCGCGGTGGCGGAATCGGCAGACGCAGCAGACTCAAAATCTGCCGTACGTAAGTACGTG
GGGGGGGTTCAAGTCCCTTCCGCGGCACCA
Downstream region at tRNA end position 
gtatattcag
Secondary structure (Cloverleaf model)
>WENV170644014	Leu	CAA
                   a      ACCA gtatattcag
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     A
    C       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGTACGTAAGTACGTGGG
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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