The detailed information of tRNA gene sequence


Sequence ID>WENV170644018
Genome IDJMBV01022087
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 339
End posion on genome 429
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atggtggaat
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGGGCGGTCTTGAAAACCGTTGGGGTCTTATGGCC
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtttttatgg
Secondary structure (Cloverleaf model)
>WENV170644018	Ser	TGA
                   t      GCCA gtttttatgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGGTCTTATGGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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