The detailed information of tRNA gene sequence


Sequence ID>WENV170644028
Genome IDJMBV01023190
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 168
End posion on genome 260
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cataaatcag
tRNA gene sequence 
GGAGAGATGGCCGAGAGGTCGAAGGCGGTCGCCTGCTAAGCGATTAAGCGGTTAATAGCT
GCTTCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tacaaactta
Secondary structure (Cloverleaf model)
>WENV170644028	Ser	GCT
                   g      GCCA tacaaactta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      A G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAGCGGTTAATAGCTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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