The detailed information of tRNA gene sequence


Sequence ID>WENV170644030
Genome IDJMBV01023461
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 238
End posion on genome 313
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctagtactT
tRNA gene sequence 
GGTGGGATAGCTCAGTTGGTTAGAGCATGGGATTCATAAACCCAAGGTCGGTGGTTCGAT
TCCACTTCCCACCATac
Downstream region at tRNA end position 
tttaaagata
Secondary structure (Cloverleaf model)
>WENV170644030	Met	CAT
                   T      ATac tttaaagata
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A   A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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