The detailed information of tRNA gene sequence


Sequence ID>WENV170644046
Genome IDJMBV01027716
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 155
End posion on genome 234
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgtcgcagG
tRNA gene sequence 
GGGGGAGTAGCTCAATTGGCTAGAGTAGCGGTCTCCAAAACCGTTGGTTGCGGGTTCGAT
TCCTGCCTCCCCCCTGCCA
Downstream region at tRNA end position 
tgagcaaata
Secondary structure (Cloverleaf model)
>WENV170644046	Trp	CCA
                   G      GCCA tgagcaaata
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A   C
                     G - C          C C
                    T     T C C G T     T
      T A A        A      + | | +       T
    T       C T C G       G G G T T     A
    G       | | | +                 C G
    G       G A G T
      C T A        A     TGGTTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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