The detailed information of tRNA gene sequence


Sequence ID>WENV170644048
Genome IDJMBV01028013
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 11
End posion on genome 83
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctgataaagg
tRNA gene sequence 
GGGGGTGTAGTTCAGCGGTAGAACGTCGGTCTCCAAAACCGAATGTCGTGGGTTCGAGTC
CTGCCACCCCCCCtg
Downstream region at tRNA end position 
ccatataacg
Secondary structure (Cloverleaf model)
>WENV170644048	Trp	CCA
                   g      CCtg ccatataacg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
        G A        A      | + + | |     G
      C     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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