The detailed information of tRNA gene sequence


Sequence ID>WENV170644060
Genome IDJMBV01030159
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 52
End posion on genome 141
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatcggcatt
tRNA gene sequence 
GGAGAGATGTCTGAGTGGTCGAAAGAGACGGTCTTGAAAACCGTTGTACAGTCTTCTGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
taatcgactg
Secondary structure (Cloverleaf model)
>WENV170644060	Ser	TGA
                   t      GCCA taatcgactg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      C G A        G     TGTACAGTCTTCTGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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