The detailed information of tRNA gene sequence


Sequence ID>WENV170644062
Genome IDJMBV01030427
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 393
End posion on genome 320
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCGGATAGCTCAGCGGGAGAGCACCTGCCTTACACGCAGGGGTCGCAGGTTCGAAACC
TGCTCCGCCCACCA
Downstream region at tRNA end position 
aaaaagtaca
Secondary structure (Cloverleaf model)
>WENV170644062	Val	TAC
                   n      ACCA aaaaagtaca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          A A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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