The detailed information of tRNA gene sequence


Sequence ID>WENV170644063
Genome IDJMBV01030496
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 85
End posion on genome 161
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccggaagatc
tRNA gene sequence 
GGGCTTATAGCTCAGCTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCGGGGGGGGTTCA
AATCCCCCTGAGTCCACtt
Downstream region at tRNA end position 
caatgcaccc
Secondary structure (Cloverleaf model)
>WENV170644063	Ala	TGC
                   c      ACtt caatgcaccc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T + G
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCCGGG
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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