The detailed information of tRNA gene sequence


Sequence ID>WENV170644067
Genome IDJMBV01031817
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 62
End posion on genome 139
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atgatccggg
tRNA gene sequence 
GGGGACGTGGCTCAGGGGGGGGAGAGCGCCTGACTCACATTCAGGAGGTCGGAGGTTCAA
ATCCTCTCGTCCCCACCA
Downstream region at tRNA end position 
atataaattt
Secondary structure (Cloverleaf model)
>WENV170644067	Val	CAC
                   g      ACCA atataaattt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
    G G G A        G      + | | | |     A
  G         C T C G       G G A G G     C
  G         | | | |                 T T
  G         G A G C
    G G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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