The detailed information of tRNA gene sequence


Sequence ID>WENV170644069
Genome IDJMBV01032517
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 65
End posion on genome 140
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctccatattt
tRNA gene sequence 
GGGCGGGTGGCGAAGTGGCTAACGCTGTGGTCTGCAAAATCACCATTCACCGGTTCAAAT
CCGGTCCCGCCCTCCA
Downstream region at tRNA end position 
tataagcagt
Secondary structure (Cloverleaf model)
>WENV170644069	Cys	GCA
                   t      TCCA tataagcagt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
      T G A        G      | | | | |     A
    G       A G C G       A C C G G     C
    G         | | |                 T T
    C       A C G C
      T A          T     CATTC
                    G - C
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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