The detailed information of tRNA gene sequence


Sequence ID>WENV170644070
Genome IDJMBV01032721
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 226
End posion on genome 150
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaaagacac
tRNA gene sequence 
GGGCTTATAGCTCAGGTGGCTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACCTAAGCCCACCA
Downstream region at tRNA end position 
tttgcatcgg
Secondary structure (Cloverleaf model)
>WENV170644070	Ile	GAT
                   c      ACCA tttgcatcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T G
                    T     C C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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