The detailed information of tRNA gene sequence


Sequence ID>WENV170644077
Genome IDJMBV01033099
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 177
End posion on genome 255
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttattttagt
tRNA gene sequence 
GTGCCCGTAGCTCAGTTGGATAGAGCGGCGGATTCCTAATCCGCGTCTGTCGCAGGTTCG
AATCCTGCCGGGTGCACCA
Downstream region at tRNA end position 
tttattttga
Secondary structure (Cloverleaf model)
>WENV170644077	Arg	CCT
                   t      ACCA tttattttga
                     G - C
                     T + G
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     GTCTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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